GitHub - tgac-vumc/ACE: Absolute Copy Number Estimation using low-coverage whole genome sequencing data

Absolute Copy Number Estimation using low-coverage whole genome sequencing data - tgac-vumc/ACE

Low-Pass Whole Genome Sequencing

GitHub - yuchaojiang/CODEX2: Full-spectrum copy number variation detection by high-throughput DNA sequencing

Accurate quantification of copy-number aberrations and whole-genome duplications in multi-sample tumor sequencing data

GitHub - Nealelab/whole_genome_analysis_pipeline

Detection of Copy Number Variation using Shallow Whole Genome Sequencing Data to replace Array-Comparative Genomic Hybridization Analysis

GATK-gCNV enables the discovery of rare copy number variants from exome sequencing data

Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets

American Society for Clinical Pharmacology and Therapeutics - 2019 - Clinical Pharmacology & Therapeutics - Wiley Online Library

PDF) Low-Coverage Whole Genome Sequencing Using Laser Capture Microscopy with Combined Digital Droplet PCR: An Effective Tool to Study Copy Number and Kras Mutations in Early Lung Adenocarcinoma Development

CNAplot — Software for visual inspection of chromosomal copy number alteration in cancer using juxtaposed sequencing read depth ratios and variant allele frequencies - SoftwareX

DNA copy number profiling: from bulk tissue to single cells

ClinSV: clinical grade structural and copy number variant detection from whole genome sequencing data, Genome Medicine

CODEX2: full-spectrum copy number variation detection by high-throughput DNA sequencing, Genome Biology

jpoell · GitHub